Publications

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Journal Publications

  • Discovering Optimization Algorithms Through Automated Learning, Eric A. Breimer, Mark K. Goldberg, David Hollinger, Darren T. Lim, DIMACS Series in Discrete Mathematics and Theoretical Computer Science Vol. 69, pp. 7-27, 2005.
  • A Learning Algorithm for the Longest Common Subsequence Problem, Eric Breimer, Mark Goldberg, Darren Lim, ACM Journal of Experimental Algorithms (online) Vol. 8, Article 4, 2003.
  • On the Height of a Random Set of Points in a d-dimensional Unit Cube, Eric A. Breimer, Mark K. Goldberg, Brian Kolstad, Malik Magdon-Ismail, Journal of Experimental MathematicsVol. 10, No. 4, pp. 583-597, 2001.

Refereed Conference Proceedings

  • Intrusion Detection: A Bioinformatics Approach, Scott Coull, Joel Branch, Boleslaw Szymanski, Eric Breimer, 19th Annual Computer Security Applications Conference, December 8-12, 2003, Las Vegas Proceedings, pp. 24-33.
  • A Supervised Learning Approach for Detecting Significant Local Alignments, Eric A. Breimer, Mark K. Goldberg, International Conference on Research in Computational Molecular Biology, April 18-21, 2002, Washington DC, Currents in Computational Molecular Biology, pp. 26 - 27.
  • Learning Significant Alignments: An Alternative to Normalized Local Alignment, Eric A. Breimer, Mark K. Goldberg, 13th International Symposium on Methodologies for Intelligent Systems, June 27-29, 2002, Lyon, France. Lecture Notes in Computer Science, Vol. 2366, pp. 37-45.
  • Experimental Evaluation of the Height of a Random Set of Points in a d-dimensional Cube, Eric A. Breimer, Mark K. Goldberg, Brian Kolstad, Malik Magdon-Ismail, Workshop on Algorithm Engineering and Experiments, January 5-7, 2001, Washington DC.
  • A Learning Algorithm for the Longest Common Subsequence Problem, Eric A. Breimer, Mark K. Goldberg, Darren T. Lim, Workshop on Algorithm Engineering and Experiments, January 7-8, 2000, San Francisco.
  • A Task-based Architecture for Application-aware Adjuncts, Robert Farrell, Peter Fairweather, Eric Breimer, International Conference on Intelligent User Interfaces, January 9-12, 2000, New Orleans.

Technical Reports

  • Case Study of a Learning Algorithm for the Longest Common Subsequence Problem, Eric A. Breimer, Mark K. Goldberg, Computer Science Technical Report, Rensselaer Polytechnic Institute, 1998.
  • Exploring Collaborative Learning in Rensselaer's Classroom-in-the-Round, Robert F.Dugan, Eric A. Breimer, Darren T. Lim, Ephraim P. Glinert, Mark K. Goldberg, Computer Science Technical Report, Rensselaer Polytechnic Institute, 1998.